Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp2aQ9DB34 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Chmp2aQ9DB34 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Gm18959-201ENSMUST00000208954 655 ntBASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp2aQ9DB34 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp2aQ9DB34 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2aQ9DB34 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2aQ9DB34 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2aQ9DB34 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chmp2aQ9DB34 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp2aQ9DB34 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp2aQ9DB34 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Mir5130-201ENSMUST00000175160 84 ntBASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp2aQ9DB34 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms