Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.82□□□□□ -0.36
Chchd1Q9CQA6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chchd1Q9CQA6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Asic1-205ENSMUST00000228185 1818 ntBASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.8□□□□□ -0.36
Chchd1Q9CQA6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Gm43566-201ENSMUST00000196851 808 ntBASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chchd1Q9CQA6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chchd1Q9CQA6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chchd1Q9CQA6 Prob1-201ENSMUST00000097619 3021 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms