Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.78■□□□□ 0.44
Clp1Q99LI9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Clp1Q99LI9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.77■□□□□ 0.44
Clp1Q99LI9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Gm44430-201ENSMUST00000203376 995 ntBASIC17.77■□□□□ 0.44
Clp1Q99LI9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.77■□□□□ 0.44
Clp1Q99LI9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clp1Q99LI9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clp1Q99LI9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clp1Q99LI9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clp1Q99LI9 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.76■□□□□ 0.43
Clp1Q99LI9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Gm12350-201ENSMUST00000121208 462 ntBASIC17.76■□□□□ 0.43
Clp1Q99LI9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.76■□□□□ 0.43
Clp1Q99LI9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Gm10060-201ENSMUST00000212002 111 ntBASIC17.76■□□□□ 0.43
Clp1Q99LI9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.76■□□□□ 0.43
Clp1Q99LI9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clp1Q99LI9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clp1Q99LI9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clp1Q99LI9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clp1Q99LI9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clp1Q99LI9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clp1Q99LI9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms