Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tram1Q91V04 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.54□□□□□ -0.08
Tram1Q91V04 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tram1Q91V04 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.54□□□□□ -0.08
Tram1Q91V04 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.54□□□□□ -0.08
Tram1Q91V04 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tram1Q91V04 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.54□□□□□ -0.08
Tram1Q91V04 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tram1Q91V04 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Tram1Q91V04 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tram1Q91V04 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.52□□□□□ -0.08
Tram1Q91V04 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Flg-201ENSMUST00000050758 1488 ntBASIC14.52□□□□□ -0.08
Tram1Q91V04 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.52□□□□□ -0.08
Tram1Q91V04 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.52□□□□□ -0.08
Tram1Q91V04 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tram1Q91V04 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.52□□□□□ -0.09
Tram1Q91V04 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tram1Q91V04 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.51□□□□□ -0.09
Tram1Q91V04 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tram1Q91V04 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tram1Q91V04 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.51□□□□□ -0.09
Tram1Q91V04 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.51□□□□□ -0.09
Tram1Q91V04 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.51□□□□□ -0.09
Tram1Q91V04 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tram1Q91V04 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.51□□□□□ -0.09
Tram1Q91V04 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tram1Q91V04 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms