Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Gm5408-201ENSMUST00000197998 747 ntBASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdh18Q8VHR0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh18Q8VHR0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh18Q8VHR0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Gm29257-201ENSMUST00000186115 639 ntBASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh18Q8VHR0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms