Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.52■□□□□ 0.24
Q8VDP2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Q8VDP2 Tgds-204ENSMUST00000228543 1594 ntBASIC16.52■□□□□ 0.24
Q8VDP2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.52■□□□□ 0.24
Q8VDP2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Q8VDP2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Q8VDP2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Q8VDP2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Q8VDP2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Q8VDP2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.52■□□□□ 0.23
Q8VDP2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Q8VDP2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Q8VDP2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Q8VDP2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.51■□□□□ 0.23
Q8VDP2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Q8VDP2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Q8VDP2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Mir7075-201ENSMUST00000184187 82 ntBASIC16.51■□□□□ 0.23
Q8VDP2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.51■□□□□ 0.23
Q8VDP2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.51■□□□□ 0.23
Q8VDP2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Q8VDP2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.5■□□□□ 0.23
Q8VDP2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Asic1-205ENSMUST00000228185 1818 ntBASIC16.5■□□□□ 0.23
Q8VDP2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Q8VDP2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Gm6139-201ENSMUST00000079261 882 ntBASIC16.5■□□□□ 0.23
Q8VDP2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Q8VDP2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Q8VDP2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Q8VDP2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.49■□□□□ 0.23
Q8VDP2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Q8VDP2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.49■□□□□ 0.23
Q8VDP2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.49■□□□□ 0.23
Q8VDP2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Q8VDP2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Q8VDP2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q8VDP2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms