Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Syne4Q8CII8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Syne4Q8CII8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Syne4Q8CII8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Syne4Q8CII8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Syne4Q8CII8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.07■□□□□ 0.64
Syne4Q8CII8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Gm5364-201ENSMUST00000216789 889 ntBASIC19.07■□□□□ 0.64
Syne4Q8CII8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Syne4Q8CII8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Syne4Q8CII8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.05■□□□□ 0.64
Syne4Q8CII8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Syne4Q8CII8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Gm2213-201ENSMUST00000197485 688 ntBASIC19.04■□□□□ 0.64
Syne4Q8CII8 Gm44430-201ENSMUST00000203376 995 ntBASIC19.04■□□□□ 0.64
Syne4Q8CII8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Syne4Q8CII8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.03■□□□□ 0.64
Syne4Q8CII8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.03■□□□□ 0.64
Syne4Q8CII8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Syne4Q8CII8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.02■□□□□ 0.64
Syne4Q8CII8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Syne4Q8CII8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms