Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Calcoco1Q8CGU1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Calcoco1Q8CGU1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Calcoco1Q8CGU1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Gm13168-201ENSMUST00000121771 632 ntBASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Calcoco1Q8CGU1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Gm8520-201ENSMUST00000186517 868 ntBASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Calcoco1Q8CGU1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Calcoco1Q8CGU1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Calcoco1Q8CGU1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Calcoco1Q8CGU1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Calcoco1Q8CGU1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Calcoco1Q8CGU1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Gm22240-201ENSMUST00000175225 82 ntBASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.58■□□□□ 0.4
Calcoco1Q8CGU1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Calcoco1Q8CGU1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Calcoco1Q8CGU1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms