Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rab43Q8CG50 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.43■□□□□ 0.22
Rab43Q8CG50 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rab43Q8CG50 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Phf7-203ENSMUST00000226565 1971 ntBASIC16.42■□□□□ 0.22
Rab43Q8CG50 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rab43Q8CG50 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.41■□□□□ 0.22
Rab43Q8CG50 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Gm34391-201ENSMUST00000203706 907 ntBASIC16.41■□□□□ 0.22
Rab43Q8CG50 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.41■□□□□ 0.22
Rab43Q8CG50 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rab43Q8CG50 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.4■□□□□ 0.22
Rab43Q8CG50 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rab43Q8CG50 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.4■□□□□ 0.22
Rab43Q8CG50 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Birc2-201ENSMUST00000054878 378 ntBASIC16.4■□□□□ 0.22
Rab43Q8CG50 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.4■□□□□ 0.22
Rab43Q8CG50 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rab43Q8CG50 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rab43Q8CG50 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.39■□□□□ 0.21
Rab43Q8CG50 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.39■□□□□ 0.21
Rab43Q8CG50 Gm44771-201ENSMUST00000206975 626 ntBASIC16.39■□□□□ 0.21
Rab43Q8CG50 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.39■□□□□ 0.21
Rab43Q8CG50 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.39■□□□□ 0.21
Rab43Q8CG50 Mzt1-203ENSMUST00000227948 952 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms