Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Rprl3-201ENSMUST00000157400 290 ntBASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim52Q8CDV4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.79■□□□□ 0.92
Trim52Q8CDV4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Mzt1-203ENSMUST00000227948 952 ntBASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim52Q8CDV4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Gm13884-201ENSMUST00000118103 829 ntBASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Gm28659-201ENSMUST00000188013 759 ntBASIC20.78■□□□□ 0.92
Trim52Q8CDV4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim52Q8CDV4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Mir8098-201ENSMUST00000184011 137 ntBASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Gm5864-201ENSMUST00000202263 970 ntBASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Gm44771-201ENSMUST00000206975 626 ntBASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim52Q8CDV4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Trim52Q8CDV4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim52Q8CDV4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim52Q8CDV4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms