Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lysmd4Q8CC84 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Lysmd4Q8CC84 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Gm12933-201ENSMUST00000120203 872 ntBASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Gm5408-201ENSMUST00000197998 747 ntBASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.13■□□□□ 0.01
Lysmd4Q8CC84 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms