Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpne3Q8BT60 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Gm15378-201ENSMUST00000121894 207 ntBASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne3Q8BT60 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Gm5643-201ENSMUST00000117081 966 ntBASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Gm24841-201ENSMUST00000158676 357 ntBASIC16.27■□□□□ 0.2
Cpne3Q8BT60 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne3Q8BT60 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne3Q8BT60 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cpne3Q8BT60 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne3Q8BT60 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne3Q8BT60 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cpne3Q8BT60 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.27■□□□□ 0.19
Cpne3Q8BT60 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne3Q8BT60 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne3Q8BT60 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms