Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn3bQ8BHK2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn3bQ8BHK2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn3bQ8BHK2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn3bQ8BHK2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn3bQ8BHK2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn3bQ8BHK2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Mir2861-201ENSMUST00000175539 82 ntBASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn3bQ8BHK2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.71■□□□□ 0.11
Scn3bQ8BHK2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn3bQ8BHK2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scn3bQ8BHK2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scn3bQ8BHK2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scn3bQ8BHK2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scn3bQ8BHK2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Flg-201ENSMUST00000050758 1488 ntBASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn3bQ8BHK2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms