Protein–RNA interactions for Protein: Q80U78

Pum1, Pumilio homolog 1, mousemouse

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum1Q80U78 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pum1Q80U78 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pum1Q80U78 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.71■□□□□ 0.27
Pum1Q80U78 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pum1Q80U78 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pum1Q80U78 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pum1Q80U78 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.71■□□□□ 0.27
Pum1Q80U78 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pum1Q80U78 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pum1Q80U78 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.7■□□□□ 0.26
Pum1Q80U78 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.7■□□□□ 0.26
Pum1Q80U78 Gm7862-201ENSMUST00000121461 292 ntBASIC16.7■□□□□ 0.26
Pum1Q80U78 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Gm6376-201ENSMUST00000209407 580 ntBASIC16.7■□□□□ 0.26
Pum1Q80U78 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pum1Q80U78 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pum1Q80U78 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pum1Q80U78 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Gm37025-201ENSMUST00000195159 829 ntBASIC16.69■□□□□ 0.26
Pum1Q80U78 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pum1Q80U78 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pum1Q80U78 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
Pum1Q80U78 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.68■□□□□ 0.26
Pum1Q80U78 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pum1Q80U78 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pum1Q80U78 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pum1Q80U78 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Pum1Q80U78 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.68■□□□□ 0.26
Pum1Q80U78 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pum1Q80U78 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pum1Q80U78 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.67■□□□□ 0.26
Pum1Q80U78 Actl10-202ENSMUST00000226583 1501 ntBASIC16.67■□□□□ 0.26
Pum1Q80U78 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.67■□□□□ 0.26
Pum1Q80U78 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.67■□□□□ 0.26
Pum1Q80U78 Gm24513-201ENSMUST00000174964 138 ntBASIC16.67■□□□□ 0.26
Pum1Q80U78 Gm27397-201ENSMUST00000184997 107 ntBASIC16.67■□□□□ 0.26
Pum1Q80U78 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.67■□□□□ 0.26
Pum1Q80U78 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.67■□□□□ 0.26
Pum1Q80U78 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pum1Q80U78 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pum1Q80U78 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pum1Q80U78 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pum1Q80U78 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms