Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Gm13158-201ENSMUST00000122007 736 ntBASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Gm10517-202ENSMUST00000192970 758 ntBASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dhx40Q6PE54 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.75■□□□□ 0.59
Dhx40Q6PE54 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Gm20760-201ENSMUST00000179197 648 ntBASIC18.74■□□□□ 0.59
Dhx40Q6PE54 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Dhx40Q6PE54 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Gm27275-201ENSMUST00000184318 272 ntBASIC18.73■□□□□ 0.59
Dhx40Q6PE54 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
Dhx40Q6PE54 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.72■□□□□ 0.59
Dhx40Q6PE54 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Dhx40Q6PE54 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms