Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc2Q6PDG5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc2Q6PDG5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.66■□□□□ 0.74
Smarcc2Q6PDG5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Smarcc2Q6PDG5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm10231-201ENSMUST00000181584 441 ntBASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm2274-201ENSMUST00000184539 609 ntBASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm10175-202ENSMUST00000208752 441 ntBASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm7791-201ENSMUST00000219066 539 ntBASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc2Q6PDG5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Gm18959-201ENSMUST00000208954 655 ntBASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcc2Q6PDG5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Smarcc2Q6PDG5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms