Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sox19Q62249 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.43□□□□□ -0.1
Sox19Q62249 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox19Q62249 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.43□□□□□ -0.1
Sox19Q62249 Mir6349-201ENSMUST00000184059 97 ntBASIC14.43□□□□□ -0.1
Sox19Q62249 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.43□□□□□ -0.1
Sox19Q62249 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sox19Q62249 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Sox19Q62249 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sox19Q62249 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sox19Q62249 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox19Q62249 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox19Q62249 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox19Q62249 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Sox19Q62249 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox19Q62249 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox19Q62249 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.41□□□□□ -0.1
Sox19Q62249 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox19Q62249 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Sox19Q62249 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox19Q62249 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Sox19Q62249 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox19Q62249 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox19Q62249 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Sox19Q62249 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sox19Q62249 Gm10033-202ENSMUST00000211874 928 ntBASIC14.4□□□□□ -0.1
Sox19Q62249 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.4□□□□□ -0.1
Sox19Q62249 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox19Q62249 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox19Q62249 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox19Q62249 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox19Q62249 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox19Q62249 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox19Q62249 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms