Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SspnQ62147 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SspnQ62147 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SspnQ62147 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.12□□□□□ -0.15
SspnQ62147 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.12□□□□□ -0.15
SspnQ62147 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.12□□□□□ -0.15
SspnQ62147 Gm43183-201ENSMUST00000200632 547 ntBASIC14.12□□□□□ -0.15
SspnQ62147 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SspnQ62147 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.12□□□□□ -0.15
SspnQ62147 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.12□□□□□ -0.15
SspnQ62147 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SspnQ62147 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SspnQ62147 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SspnQ62147 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SspnQ62147 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SspnQ62147 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SspnQ62147 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SspnQ62147 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.11□□□□□ -0.15
SspnQ62147 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.11□□□□□ -0.15
SspnQ62147 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.11□□□□□ -0.15
SspnQ62147 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SspnQ62147 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SspnQ62147 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.1□□□□□ -0.15
SspnQ62147 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SspnQ62147 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.1□□□□□ -0.15
SspnQ62147 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SspnQ62147 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SspnQ62147 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SspnQ62147 Gm15378-201ENSMUST00000121894 207 ntBASIC14.09□□□□□ -0.15
SspnQ62147 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SspnQ62147 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SspnQ62147 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SspnQ62147 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SspnQ62147 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SspnQ62147 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SspnQ62147 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SspnQ62147 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.09□□□□□ -0.15
SspnQ62147 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SspnQ62147 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SspnQ62147 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SspnQ62147 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.08□□□□□ -0.15
SspnQ62147 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SspnQ62147 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms