Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Gm9731-201ENSMUST00000209480 747 ntBASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5d-4Q5R1F6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.48□□□□□ -0.09
Trav5d-4Q5R1F6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5d-4Q5R1F6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms