Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm7291-201ENSMUST00000199147 382 ntBASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm6365-201ENSMUST00000054711 744 ntBASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms