Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.31■□□□□ 0.2
Rnf44Q3UHJ8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Rnf44Q3UHJ8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf44Q3UHJ8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Gm13836-201ENSMUST00000121159 501 ntBASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf44Q3UHJ8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf44Q3UHJ8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.27■□□□□ 0.19
Rnf44Q3UHJ8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.27■□□□□ 0.19
Rnf44Q3UHJ8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.27■□□□□ 0.19
Rnf44Q3UHJ8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf44Q3UHJ8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf44Q3UHJ8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf44Q3UHJ8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf44Q3UHJ8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms