Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Q3KNL4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Q3KNL4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.6■□□□□ 0.25
Q3KNL4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Gm10517-202ENSMUST00000192970 758 ntBASIC16.6■□□□□ 0.25
Q3KNL4 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.6■□□□□ 0.25
Q3KNL4 Trmt13-210ENSMUST00000198454 880 ntBASIC16.6■□□□□ 0.25
Q3KNL4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.6■□□□□ 0.25
Q3KNL4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Q3KNL4 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.6■□□□□ 0.25
Q3KNL4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.6■□□□□ 0.25
Q3KNL4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Q3KNL4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.59■□□□□ 0.25
Q3KNL4 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.59■□□□□ 0.25
Q3KNL4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.59■□□□□ 0.25
Q3KNL4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Q3KNL4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.59■□□□□ 0.25
Q3KNL4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.59■□□□□ 0.25
Q3KNL4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Q3KNL4 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.58■□□□□ 0.25
Q3KNL4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q3KNL4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.58■□□□□ 0.25
Q3KNL4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q3KNL4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Q3KNL4 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.58■□□□□ 0.24
Q3KNL4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Q3KNL4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Q3KNL4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Q3KNL4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.57■□□□□ 0.24
Q3KNL4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.57■□□□□ 0.24
Q3KNL4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.57■□□□□ 0.24
Q3KNL4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.57■□□□□ 0.24
Q3KNL4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.57■□□□□ 0.24
Q3KNL4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Q3KNL4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q3KNL4 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.57■□□□□ 0.24
Q3KNL4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.56■□□□□ 0.24
Q3KNL4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Gm37856-201ENSMUST00000191634 999 ntBASIC16.56■□□□□ 0.24
Q3KNL4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q3KNL4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.56■□□□□ 0.24
Q3KNL4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Q3KNL4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q3KNL4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms