Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx1P63006 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx1P63006 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx1P63006 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Gm33142-201ENSMUST00000193913 867 ntBASIC16.58■□□□□ 0.24
Lhx1P63006 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.58■□□□□ 0.24
Lhx1P63006 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx1P63006 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Lhx1P63006 Gm11336-201ENSMUST00000118168 334 ntBASIC16.57■□□□□ 0.24
Lhx1P63006 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lhx1P63006 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.57■□□□□ 0.24
Lhx1P63006 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.57■□□□□ 0.24
Lhx1P63006 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.57■□□□□ 0.24
Lhx1P63006 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Lhx1P63006 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lhx1P63006 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx1P63006 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.56■□□□□ 0.24
Lhx1P63006 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lhx1P63006 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lhx1P63006 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Lhx1P63006 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx1P63006 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.55■□□□□ 0.24
Lhx1P63006 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Phf7-203ENSMUST00000226565 1971 ntBASIC16.55■□□□□ 0.24
Lhx1P63006 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.55■□□□□ 0.24
Lhx1P63006 Gm29518-201ENSMUST00000190858 372 ntBASIC16.55■□□□□ 0.24
Lhx1P63006 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lhx1P63006 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Lhx1P63006 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Lhx1P63006 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lhx1P63006 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lhx1P63006 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lhx1P63006 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lhx1P63006 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms