Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Gm8587-201ENSMUST00000076538 843 ntBASIC20.68■□□□□ 0.9
Tm6sf1P58749 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.68■□□□□ 0.9
Tm6sf1P58749 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tm6sf1P58749 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tm6sf1P58749 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Gm22697-201ENSMUST00000175194 63 ntBASIC20.66■□□□□ 0.9
Tm6sf1P58749 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.66■□□□□ 0.9
Tm6sf1P58749 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tm6sf1P58749 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tm6sf1P58749 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tm6sf1P58749 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tm6sf1P58749 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tm6sf1P58749 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tm6sf1P58749 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Tm6sf1P58749 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Gm11336-201ENSMUST00000118168 334 ntBASIC20.64■□□□□ 0.89
Tm6sf1P58749 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.64■□□□□ 0.89
Tm6sf1P58749 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tm6sf1P58749 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms