Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.01□□□□□ -0.17
Nkx2-1P50220 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nkx2-1P50220 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Gm13509-201ENSMUST00000119733 1308 ntBASIC14□□□□□ -0.17
Nkx2-1P50220 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14□□□□□ -0.17
Nkx2-1P50220 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14□□□□□ -0.17
Nkx2-1P50220 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14□□□□□ -0.17
Nkx2-1P50220 Gm27405-201ENSMUST00000184201 112 ntBASIC14□□□□□ -0.17
Nkx2-1P50220 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-1P50220 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Gm6365-201ENSMUST00000054711 744 ntBASIC13.99□□□□□ -0.17
Nkx2-1P50220 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.99□□□□□ -0.17
Nkx2-1P50220 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-1P50220 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Gm2399-201ENSMUST00000104944 225 ntBASIC13.98□□□□□ -0.17
Nkx2-1P50220 Gm13401-201ENSMUST00000117074 291 ntBASIC13.98□□□□□ -0.17
Nkx2-1P50220 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.98□□□□□ -0.17
Nkx2-1P50220 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Zfp783-201ENSMUST00000095946 670 ntBASIC13.98□□□□□ -0.17
Nkx2-1P50220 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nkx2-1P50220 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.97□□□□□ -0.17
Nkx2-1P50220 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-1P50220 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms