Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd9P40240 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd9P40240 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cd9P40240 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd9P40240 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd9P40240 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cd9P40240 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.6■□□□□ 0.25
Cd9P40240 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cd9P40240 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.6■□□□□ 0.25
Cd9P40240 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cd9P40240 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd9P40240 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.59■□□□□ 0.25
Cd9P40240 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cd9P40240 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cd9P40240 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Phf7-203ENSMUST00000226565 1971 ntBASIC16.59■□□□□ 0.25
Cd9P40240 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Mir1668-201ENSMUST00000184114 107 ntBASIC16.59■□□□□ 0.25
Cd9P40240 Gm44450-201ENSMUST00000199528 114 ntBASIC16.59■□□□□ 0.25
Cd9P40240 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.59■□□□□ 0.25
Cd9P40240 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.59■□□□□ 0.25
Cd9P40240 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cd9P40240 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cd9P40240 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd9P40240 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cd9P40240 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cd9P40240 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.58■□□□□ 0.25
Cd9P40240 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Cd9P40240 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.58■□□□□ 0.24
Cd9P40240 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.58■□□□□ 0.24
Cd9P40240 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.58■□□□□ 0.24
Cd9P40240 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.58■□□□□ 0.24
Cd9P40240 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cd9P40240 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cd9P40240 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.57■□□□□ 0.24
Cd9P40240 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cd9P40240 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.57■□□□□ 0.24
Cd9P40240 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.57■□□□□ 0.24
Cd9P40240 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cd9P40240 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cd9P40240 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cd9P40240 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cd9P40240 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cd9P40240 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Cd9P40240 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.56■□□□□ 0.24
Cd9P40240 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.56■□□□□ 0.24
Cd9P40240 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cd9P40240 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.56■□□□□ 0.24
Cd9P40240 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.56■□□□□ 0.24
Cd9P40240 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.56■□□□□ 0.24
Cd9P40240 Gm45058-201ENSMUST00000205810 766 ntBASIC16.56■□□□□ 0.24
Cd9P40240 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cd9P40240 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms