Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.91□□□□□ -0.18
Sdc1P18828 Gm43137-201ENSMUST00000198052 594 ntBASIC13.91□□□□□ -0.18
Sdc1P18828 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.91□□□□□ -0.18
Sdc1P18828 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Sdc1P18828 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sdc1P18828 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.91□□□□□ -0.18
Sdc1P18828 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Sdc1P18828 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sdc1P18828 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sdc1P18828 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sdc1P18828 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sdc1P18828 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.9□□□□□ -0.18
Sdc1P18828 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.9□□□□□ -0.18
Sdc1P18828 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Sdc1P18828 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.9□□□□□ -0.18
Sdc1P18828 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sdc1P18828 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Sdc1P18828 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sdc1P18828 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sdc1P18828 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sdc1P18828 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.89□□□□□ -0.19
Sdc1P18828 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.89□□□□□ -0.19
Sdc1P18828 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Sdc1P18828 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sdc1P18828 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.89□□□□□ -0.19
Sdc1P18828 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Gm9847-201ENSMUST00000052528 599 ntBASIC13.89□□□□□ -0.19
Sdc1P18828 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sdc1P18828 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Sdc1P18828 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sdc1P18828 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sdc1P18828 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sdc1P18828 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sdc1P18828 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.88□□□□□ -0.19
Sdc1P18828 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.88□□□□□ -0.19
Sdc1P18828 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Sdc1P18828 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sdc1P18828 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sdc1P18828 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms