Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Gm11336-201ENSMUST00000118168 334 ntBASIC15.21■□□□□ 0.03
Cd46O88174 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cd46O88174 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cd46O88174 Gm43347-201ENSMUST00000200226 580 ntBASIC15.21■□□□□ 0.03
Cd46O88174 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cd46O88174 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cd46O88174 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cd46O88174 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd46O88174 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd46O88174 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cd46O88174 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.2■□□□□ 0.02
Cd46O88174 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.2■□□□□ 0.02
Cd46O88174 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.2■□□□□ 0.02
Cd46O88174 Gm27000-201ENSMUST00000182943 842 ntBASIC15.2■□□□□ 0.02
Cd46O88174 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.2■□□□□ 0.02
Cd46O88174 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cd46O88174 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.2■□□□□ 0.02
Cd46O88174 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cd46O88174 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cd46O88174 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cd46O88174 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Cd46O88174 Gm13186-201ENSMUST00000118031 316 ntBASIC15.19■□□□□ 0.02
Cd46O88174 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cd46O88174 AW822252-206ENSMUST00000208904 237 ntBASIC15.19■□□□□ 0.02
Cd46O88174 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.19■□□□□ 0.02
Cd46O88174 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.19■□□□□ 0.02
Cd46O88174 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.19■□□□□ 0.02
Cd46O88174 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Cd46O88174 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.19■□□□□ 0.02
Cd46O88174 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cd46O88174 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cd46O88174 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.18■□□□□ 0.02
Cd46O88174 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cd46O88174 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Gm15372-201ENSMUST00000120729 834 ntBASIC15.18■□□□□ 0.02
Cd46O88174 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.18■□□□□ 0.02
Cd46O88174 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.18■□□□□ 0.02
Cd46O88174 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.18■□□□□ 0.02
Cd46O88174 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cd46O88174 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.17■□□□□ 0.02
Cd46O88174 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.17■□□□□ 0.02
Cd46O88174 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.17■□□□□ 0.02
Cd46O88174 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.17■□□□□ 0.02
Cd46O88174 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.17■□□□□ 0.02
Cd46O88174 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.17■□□□□ 0.02
Cd46O88174 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.17■□□□□ 0.02
Cd46O88174 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cd46O88174 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms