Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn2O70591 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn2O70591 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn2O70591 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn2O70591 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.07□□□□□ -0.16
Pfdn2O70591 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn2O70591 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn2O70591 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn2O70591 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.06□□□□□ -0.16
Pfdn2O70591 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn2O70591 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Gm6420-201ENSMUST00000193885 723 ntBASIC14.06□□□□□ -0.16
Pfdn2O70591 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Pfdn2O70591 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pfdn2O70591 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn2O70591 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn2O70591 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn2O70591 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pfdn2O70591 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.05□□□□□ -0.16
Pfdn2O70591 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn2O70591 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.04□□□□□ -0.16
Pfdn2O70591 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Nespas-201ENSMUST00000143738 1083 ntBASIC14.04□□□□□ -0.16
Pfdn2O70591 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.04□□□□□ -0.16
Pfdn2O70591 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.04□□□□□ -0.16
Pfdn2O70591 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn2O70591 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pfdn2O70591 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Pfdn2O70591 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Pfdn2O70591 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pfdn2O70591 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.03□□□□□ -0.16
Pfdn2O70591 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms