Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Scamp3O35609 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
Scamp3O35609 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.79■□□□□ 0.28
Scamp3O35609 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Scamp3O35609 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.79■□□□□ 0.28
Scamp3O35609 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scamp3O35609 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scamp3O35609 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.78■□□□□ 0.28
Scamp3O35609 Gm16061-201ENSMUST00000122167 857 ntBASIC16.78■□□□□ 0.28
Scamp3O35609 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.78■□□□□ 0.28
Scamp3O35609 Gm18032-201ENSMUST00000222541 538 ntBASIC16.78■□□□□ 0.28
Scamp3O35609 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.78■□□□□ 0.28
Scamp3O35609 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scamp3O35609 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scamp3O35609 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.77■□□□□ 0.28
Scamp3O35609 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.77■□□□□ 0.28
Scamp3O35609 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.77■□□□□ 0.28
Scamp3O35609 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Gm6659-201ENSMUST00000174752 547 ntBASIC16.77■□□□□ 0.28
Scamp3O35609 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.77■□□□□ 0.28
Scamp3O35609 Gm7213-201ENSMUST00000215977 950 ntBASIC16.77■□□□□ 0.28
Scamp3O35609 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scamp3O35609 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.77■□□□□ 0.28
Scamp3O35609 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scamp3O35609 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scamp3O35609 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scamp3O35609 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scamp3O35609 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scamp3O35609 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Gm10013-201ENSMUST00000106074 672 ntBASIC16.76■□□□□ 0.27
Scamp3O35609 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Gm18101-201ENSMUST00000215769 548 ntBASIC16.76■□□□□ 0.27
Scamp3O35609 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scamp3O35609 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scamp3O35609 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scamp3O35609 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scamp3O35609 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scamp3O35609 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scamp3O35609 Gm23634-201ENSMUST00000175071 91 ntBASIC16.75■□□□□ 0.27
Scamp3O35609 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.75■□□□□ 0.27
Scamp3O35609 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scamp3O35609 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scamp3O35609 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scamp3O35609 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.74■□□□□ 0.27
Scamp3O35609 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp3O35609 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scamp3O35609 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.74■□□□□ 0.27
Scamp3O35609 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scamp3O35609 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp3O35609 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp3O35609 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scamp3O35609 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scamp3O35609 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms