Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prrt1O35449 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.31□□□□□ -0.12
Prrt1O35449 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.31□□□□□ -0.12
Prrt1O35449 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.31□□□□□ -0.12
Prrt1O35449 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.31□□□□□ -0.12
Prrt1O35449 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prrt1O35449 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prrt1O35449 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.3□□□□□ -0.12
Prrt1O35449 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prrt1O35449 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prrt1O35449 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.3□□□□□ -0.12
Prrt1O35449 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.3□□□□□ -0.12
Prrt1O35449 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prrt1O35449 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.29□□□□□ -0.12
Prrt1O35449 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Gm13401-201ENSMUST00000117074 291 ntBASIC14.29□□□□□ -0.12
Prrt1O35449 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.29□□□□□ -0.12
Prrt1O35449 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.29□□□□□ -0.12
Prrt1O35449 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.29□□□□□ -0.12
Prrt1O35449 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prrt1O35449 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prrt1O35449 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Prrt1O35449 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Prrt1O35449 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
Prrt1O35449 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.28□□□□□ -0.12
Prrt1O35449 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prrt1O35449 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.28□□□□□ -0.12
Prrt1O35449 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.28□□□□□ -0.12
Prrt1O35449 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prrt1O35449 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.28□□□□□ -0.12
Prrt1O35449 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms