Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.19□□□□□ -0.3
Tnfsf11O35235 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf11O35235 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.18□□□□□ -0.3
Tnfsf11O35235 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.18□□□□□ -0.3
Tnfsf11O35235 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tnfsf11O35235 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.17□□□□□ -0.3
Tnfsf11O35235 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tnfsf11O35235 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.16□□□□□ -0.3
Tnfsf11O35235 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Gm7514-201ENSMUST00000209475 934 ntBASIC13.16□□□□□ -0.3
Tnfsf11O35235 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tnfsf11O35235 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms