Protein–RNA interactions for Protein: J3QPI0

Gm8298, Predicted gene 8298, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8298J3QPI0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm8298J3QPI0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.19■□□□□ 0.5
Gm8298J3QPI0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm8298J3QPI0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Gm8298J3QPI0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm8298J3QPI0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm8298J3QPI0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms