Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.72□□□□□ -0.37
Col6a5A6H584 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.72□□□□□ -0.37
Col6a5A6H584 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col6a5A6H584 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a5A6H584 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col6a5A6H584 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a5A6H584 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.71□□□□□ -0.37
Col6a5A6H584 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.71□□□□□ -0.37
Col6a5A6H584 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm5866-201ENSMUST00000177881 973 ntBASIC12.71□□□□□ -0.37
Col6a5A6H584 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a5A6H584 Fst-202ENSMUST00000223640 2612 ntBASIC12.71□□□□□ -0.37
Col6a5A6H584 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Col6a5A6H584 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a5A6H584 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col6a5A6H584 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a5A6H584 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col6a5A6H584 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col6a5A6H584 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.71□□□□□ -0.38
Col6a5A6H584 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.71□□□□□ -0.38
Col6a5A6H584 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a5A6H584 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.7□□□□□ -0.38
Col6a5A6H584 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.7□□□□□ -0.38
Col6a5A6H584 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a5A6H584 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Grk6-207ENSMUST00000225925 2769 ntBASIC12.69□□□□□ -0.38
Col6a5A6H584 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.69□□□□□ -0.38
Col6a5A6H584 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Col6a5A6H584 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a5A6H584 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.68□□□□□ -0.38
Col6a5A6H584 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Col6a5A6H584 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.68□□□□□ -0.38
Col6a5A6H584 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.68□□□□□ -0.38
Col6a5A6H584 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col6a5A6H584 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms