Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm11355-201ENSMUST00000121120 306 ntBASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 AA414768-201ENSMUST00000121924 1257 ntBASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.8■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Phf7-203ENSMUST00000226565 1971 ntBASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms