Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gm22325-201ENSMUST00000158904 308 ntBASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gm6420-201ENSMUST00000193885 723 ntBASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gm7514-201ENSMUST00000209475 934 ntBASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv3-4A0A140T8Q4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gm10493-201ENSMUST00000097270 612 ntBASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Igkv3-4A0A140T8Q4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Igkv3-4A0A140T8Q4 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Ap3s1-204ENSMUST00000225520 957 ntBASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Igkv3-4A0A140T8Q4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms