Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav9d-4A0A0G2JG37 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Dancr-204ENSMUST00000132389 2347 ntBASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav9d-4A0A0G2JG37 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Nespas-201ENSMUST00000143738 1083 ntBASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.59□□□□□ -0.55
Trav9d-4A0A0G2JG37 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav9d-4A0A0G2JG37 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mir8112-201ENSMUST00000184382 131 ntBASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Gm10493-201ENSMUST00000097270 612 ntBASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav9d-4A0A0G2JG37 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav9d-4A0A0G2JG37 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms