Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Gm26524-201ENSMUST00000192339 390 ntBASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav19A0A0B4J1K4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Gm6576-201ENSMUST00000169678 883 ntBASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Mtag2-201ENSMUST00000058665 714 ntBASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav19A0A0B4J1K4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav19A0A0B4J1K4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Gm5408-201ENSMUST00000197998 747 ntBASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav19A0A0B4J1K4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms