Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mir7075-201ENSMUST00000184187 82 ntBASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gm8493-201ENSMUST00000196881 489 ntBASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav4-3A0A0B4J1K1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav4-3A0A0B4J1K1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Trav4-3A0A0B4J1K1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4-3A0A0B4J1K1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4-3A0A0B4J1K1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav4-3A0A0B4J1K1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm26833-201ENSMUST00000180899 440 ntBASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms