Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv5A0A0B4J1G9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trbv5A0A0B4J1G9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv5A0A0B4J1G9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv5A0A0B4J1G9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms