Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Sirpb1aA0A0A6YYP6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm5408-201ENSMUST00000197998 747 ntBASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm12933-201ENSMUST00000120203 872 ntBASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Mir5133-201ENSMUST00000174955 77 ntBASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Gm4968-201ENSMUST00000071458 858 ntBASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sirpb1aA0A0A6YYP6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms