Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mir2861-201ENSMUST00000175539 82 ntBASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm26571-201ENSMUST00000181399 666 ntBASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm42569-201ENSMUST00000200539 472 ntBASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm11927-201ENSMUST00000118472 759 ntBASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13-4-dv7A0A075B6C2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.65□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav13-4-dv7A0A075B6C2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms