Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-5A0A075B6B9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-5A0A075B6B9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav6d-5A0A075B6B9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Trav6d-5A0A075B6B9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6d-5A0A075B6B9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm10138-203ENSMUST00000206952 366 ntBASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm18671-201ENSMUST00000214826 683 ntBASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Mtag2-201ENSMUST00000058665 714 ntBASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6d-5A0A075B6B9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms