Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9d-3A0A075B695 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9d-3A0A075B695 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9d-3A0A075B695 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Gm24841-201ENSMUST00000158676 357 ntBASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Gm8520-201ENSMUST00000186517 868 ntBASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav9d-3A0A075B695 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav9d-3A0A075B695 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms