Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav8-1A0A075B641 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Mir7075-201ENSMUST00000184187 82 ntBASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav8-1A0A075B641 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav8-1A0A075B641 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav8-1A0A075B641 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav8-1A0A075B641 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav8-1A0A075B641 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms