Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm715-201ENSMUST00000117865 831 ntBASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm27000-201ENSMUST00000182943 842 ntBASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-7-dv9A0A075B639 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm10812-201ENSMUST00000099864 546 ntBASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-7-dv9A0A075B639 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Gm22240-201ENSMUST00000175225 82 ntBASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-7-dv9A0A075B639 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms