Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC090888.3-201ENST00000558917 509 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AL034549.2-201ENST00000618285 3373 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 AP000432.2-201ENST00000624164 2048 ntBASIC5.8□□□□□ -1.48
SIX2Q9NPC8 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SIX2Q9NPC8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 BCORP1-203ENST00000513194 5093 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 OR2AT2P-201ENST00000413438 905 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 CDY17P-201ENST00000414121 1282 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC124944.2-201ENST00000429866 1242 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RPS29P14-201ENST00000431518 171 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 NFYAP1-201ENST00000431953 972 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 GSTM5P1-201ENST00000434751 660 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RPS10P18-201ENST00000442662 495 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC105399.1-202ENST00000447303 205 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AP000797.2-201ENST00000475768 606 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC093827.1-201ENST00000480094 861 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RPS12P31-201ENST00000491419 398 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC016559.2-201ENST00000510759 359 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 MTCYBP13-201ENST00000578634 1093 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 RN7SL787P-201ENST00000613000 284 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AP005212.4-201ENST00000614206 710 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
SIX2Q9NPC8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SIX2Q9NPC8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 SAMMSON-210ENST00000641260 1308 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC092376.2-201ENST00000622621 4116 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 OR9G4-201ENST00000302957 984 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 OR1L6-202ENST00000373684 1044 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AL133388.1-201ENST00000404509 287 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC117434.1-201ENST00000419971 836 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 KCTD9P1-201ENST00000430462 1167 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AL138899.2-201ENST00000439139 499 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 OR52E7P-201ENST00000452394 933 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 CBX1P2-201ENST00000453841 458 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 RPS27AP2-201ENST00000457576 465 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 RPL35AP19-201ENST00000469425 329 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 SNRPCP3-201ENST00000474888 476 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 CBX1P5-201ENST00000475330 559 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SIX2Q9NPC8 AC090638.1-201ENST00000498296 909 ntBASIC5.78□□□□□ -1.48
SIX2Q9NPC8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms