Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPSAP51-201ENST00000497462 645 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC026782.2-201ENST00000510845 636 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 SCARNA6.1-201ENST00000516989 238 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC026688.1-201ENST00000520639 1168 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 PMS2P3-207ENST00000529061 717 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC090888.3-201ENST00000558917 509 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC022387.2-201ENST00000604050 448 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC100767.2-201ENST00000604840 693 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AC090607.5-201ENST00000615692 224 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 AL162574.1-201ENST00000615702 950 ntBASIC5.81□□□□□ -1.48
PCDH9Q9HC56 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PCDH9Q9HC56 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC091305.2-201ENST00000624049 1576 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC104964.3-201ENST00000606115 2860 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC092681.1-201ENST00000297369 291 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AL159987.1-201ENST00000347911 293 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 IPPKP1-201ENST00000422501 768 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 SETP10-201ENST00000424368 814 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 EIF2S2P3-201ENST00000428356 999 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC084754.1-201ENST00000463466 464 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC090589.1-201ENST00000473109 362 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 RPL32P33-201ENST00000487023 394 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 NPM1P21-201ENST00000513394 762 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC021678.3-201ENST00000517893 476 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 IGKV2-4-201ENST00000523070 340 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC079600.1-201ENST00000550326 297 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC009268.1-201ENST00000561352 1203 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC010632.3-201ENST00000611377 369 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AC106872.5-201ENST00000508856 1416 ntBASIC5.8□□□□□ -1.48
PCDH9Q9HC56 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PCDH9Q9HC56 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 MIR375-201ENST00000362103 64 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 RNA5SP30-201ENST00000365552 115 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 TRAV35-201ENST00000390462 330 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 GPS2P1-201ENST00000411761 986 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 NDUFB4P8-201ENST00000435351 367 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms