Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC093719.1-201ENST00000480427 441 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 RN7SL101P-201ENST00000496350 279 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AL158068.1-201ENST00000506116 616 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 MIR2117-201ENST00000516780 80 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC126615.2-201ENST00000553003 515 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC104072.1-201ENST00000568817 668 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AP005119.1-201ENST00000580956 292 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC096947.1-201ENST00000603233 470 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AC018754.1-201ENST00000607486 925 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AF129408.1-201ENST00000608767 431 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 CR589904.2-201ENST00000612533 440 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 AP003499.2-201ENST00000624100 483 ntBASIC6.08□□□□□ -1.44
USP29Q9HBJ7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP29Q9HBJ7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SAMM50P1-201ENST00000455403 1399 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 OR4K17-201ENST00000315543 1032 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 RNU6-609P-201ENST00000365459 107 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 NPM1P38-201ENST00000403835 865 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 RNA5SP178-201ENST00000410380 128 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL354868.1-201ENST00000417077 482 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL445928.1-201ENST00000435545 222 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL663074.2-201ENST00000440621 479 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL445466.1-201ENST00000448432 357 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC108729.1-201ENST00000487812 947 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC008629.2-201ENST00000503783 483 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 ST13P12-201ENST00000508958 1094 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 RNU6-1102P-201ENST00000516149 96 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SCARNA21.2-201ENST00000516600 166 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SEC11B-201ENST00000518383 499 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 VTA1P2-201ENST00000520205 911 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC090424.1-201ENST00000535243 736 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AP001357.1-201ENST00000586304 1053 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC090912.3-201ENST00000609775 533 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AL356752.1-201ENST00000615844 593 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC127024.6-201ENST00000621598 424 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC097460.3-201ENST00000623099 442 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC103703.1-201ENST00000634783 663 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AP000473.2-201ENST00000602659 1537 ntBASIC6.07□□□□□ -1.44
USP29Q9HBJ7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP29Q9HBJ7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP29Q9HBJ7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USP29Q9HBJ7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
USP29Q9HBJ7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP29Q9HBJ7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms