Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLHC1Q8NHS4 AC006206.1-201ENST00000544842 3387 ntBASIC5.33□□□□□ -1.56
CLHC1Q8NHS4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLHC1Q8NHS4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC092681.1-201ENST00000297369 291 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 RNF10P1-201ENST00000418589 369 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC013268.2-201ENST00000420753 337 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC127526.2-201ENST00000426436 775 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 RPS27AP6-201ENST00000427962 448 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC006335.2-201ENST00000437993 330 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AL512637.1-201ENST00000439523 1231 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC073465.2-201ENST00000440938 498 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC002553.2-201ENST00000453217 340 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC005165.2-201ENST00000466070 380 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 RPS17P15-201ENST00000475609 349 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 RN7SL583P-201ENST00000475692 287 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 NENFP3-201ENST00000503735 313 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 MORF4L2P1-201ENST00000503761 858 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AL671862.1-201ENST00000515851 349 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AL390334.1-201ENST00000556395 450 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC010632.3-201ENST00000611377 369 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AL390318.1-201ENST00000624564 687 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 AC097461.1-201ENST00000568928 2821 ntBASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CLHC1Q8NHS4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 OR56A4-201ENST00000330728 1209 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 SEPT7P2-202ENST00000398921 823 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC245060.4-201ENST00000413293 1121 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC239798.3-201ENST00000454459 408 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 RPL5P22-201ENST00000480199 884 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AL359715.3-201ENST00000569267 2123 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AL139124.1-201ENST00000609123 421 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC025262.3-201ENST00000623666 360 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 AC087565.3-203ENST00000641018 837 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 OR8A1-204ENST00000642111 1145 ntBASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLHC1Q8NHS4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms